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SciJava Plugins: Commands

Core commands for SciJava applications.

Artifacts using SciJava Plugins: Commands (14)
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1.ImageJ2168 usages

net.imagej » imagej BSD

ImageJ2 is a rewrite of ImageJ for multidimensional image data, with a focus on scientific imaging.
Last Release on Aug 12, 2025

2.ImageJ Legacy Bridge93 usages

net.imagej » imagej-legacy BSD

The legacy component enables backward compatibility with the original version of ImageJ (1.x). It contains the code necessary to translate between ImageJ and ImageJ2 images, so that ImageJ plugins can be executed faithfully.
Last Release on Aug 27, 2025

3.SciView8 usages

sc.iview » sciview BSD

Scenery-backed 3D visualization package for ImageJ.
Last Release on Jul 13, 2023

4.Mastodon Tracking2 usages

org.mastodon » mastodon-tracking BSD

Basic tracking algorithms based on Mastodon data structures.
Last Release on Jan 26, 2025

5.SciView2 usages

com.github.scenerygraphics » sciview BSD

Scenery-backed 3D visualization package for ImageJ.
Last Release on Jul 26, 2024

6.Mastodon Tracking1 usages

net.trndy » mastodon-tracking

Basic tracking algorithms based on Mastodon data structures.
Last Release on Mar 16, 2018

7.ImageJ Cluster1 usages

de.embl.cba » imagej-cluster BSD

Submitting and monitoring ImageJ jobs on a computer cluster
Last Release on Nov 11, 2021

8.Heart Crop

com.capsidaho » heart-crop BSD

This is a demo application for 3D cropping/segmentation of zebrafish hearts.
Last Release on Sep 27, 2019

9.SciView

com.github.frauzufall » sciview BSD

Scenery-backed 3D visualization package for ImageJ.
Last Release on Jun 5, 2025

10.Cx3D

com.github.morphonets » cx3d GPL

The Cx3D modeling framework in SciView and SNT.
Last Release on Apr 12, 2025