Group: Mastodon

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Mastodon – a large-scale tracking and track-editing framework for large, multi-view images.

Pool-objects, pools, and collections framework underlying mastodon graphs.

Graph interfaces, object- and pool-based implementations, graph algorithms, undo framework.

Basic tracking algorithms based on Mastodon data structures.

Various Mastodon plugins for use in Tomancak lab projects

An implementation of the geff library (https://github.com/live-image-tracking-tools/geff) in Java.

A Mastodon plugin data allows to show the embryo in Blender.

A collection of plugins to analyse lineages of tracked objects in Mastodon, e.g. Lineage Tree Classification, Export of ellipsoids as image, some more numerical features for Spots and BranchSpots

A Mastodon plugin that allow to collaborate on a dataset via git.

Mastodon plugins developed in the context of Pasteur users projects.

Mastodon plugin for fitting ellipsoids around spots

A selection creator UI for Mastodon, as a Mastodon plugin.