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BioJava Structure

The protein structure modules of BioJava.

Artifacts using BioJava Structure (19)
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1.Scenery10 usages

graphics.scenery » scenery LGPL

flexible scenegraphing and rendering for scientific visualisation
Last Release on Sep 2, 2025

2.BioJava Modfinder4 usages

org.biojava » biojava-modfinder LGPL

BioJava Modfinder
Last Release on May 6, 2026

3.Portal Core3 usages

com.github.cBioPortal.cbioportal » core AGPL

Core libraries shared among other modules
Last Release on Jun 7, 2025

4.Snp Effect2 usages

com.databricks » SnpEff LGPL

Variant annotation and effect prediction package.
Last Release on Jul 26, 2018

5.Scenery2 usages

com.github.scenerygraphics » scenery LGPL

flexible scenegraphing and rendering for scientific visualisation
Last Release on Apr 8, 2026

6.MMTF Encoder2 usages

org.rcsb » mmtf-encoder Apache

MMTF Encoder
Last Release on Jun 3, 2016

7.Starized Structure2 usages

tech.molecules » starized-structure Apache

Canonical structure model and BioJava/OpenChemLib bridge for Starized.
Last Release on May 2, 2026

8.TPO

com.github.e-alharbi » ToolParametersOptimizer GPL

A tool for optimizing any tool's parameters that can run from the command line
Last Release on Dec 24, 2020

9.TPO

com.github.e-alharbi » Tool-Parameters-Optimizer GPL

A tool for optimizing any tool's parameters that can run from the command line
Last Release on Dec 24, 2020

10.Scenery

com.github.randomdefaultuser » scenery LGPL

flexible scenegraphing and rendering for scientific visualisation
Last Release on Aug 26, 2021