Math functions for the Java 3D Graphics API

ModularImageAnalysis (MIA) is an ImageJ plugin which provides a modular framework for assembling image and object analysis workflows. Detected objects can be transformed, filtered, measured and related.

DEVILS as an ImageJ 1.x plugin.

QuimP software, a set of plugins for ImageJ to quantify spatio-temporal patterns of fluorescently labeled proteins in the cortex of moving cells.

Package contains image processing algorithms developed in MOSAIC Group

The ImageJ framework for semi-automated tracing of neurons and other tube-like structures.

A plugin to create SBML model from microscopic images

JFilament, 2D and 3D active contours.

The mavenized versions of the BoneJ1 plugins

The Domain Presentation Layer (DPL) of BoneJ2, i.e. the commands that wrap the needed ops, and present results for skeletal biologists.

The Domain Presentation Layer (DPL) of BoneJ2, i.e. the commands that wrap the needed ops, and present results for skeletal biologists.