BioJava is an open-source project dedicated to providing a Java framework for processing biological data. It provides analytical and statistical routines, parsers for common file formats and allows the manipulation of sequences and 3D structures. The goal of the biojava project is to facilitate rapid application development for bioinformatics.

Artifacts using Biojava3 Core (31)
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MaPSeq :: Module :: Alignment
Last Release on Apr 1, 2013
Biojava3 Sequencing
Last Release on Sep 18, 2024
Biojava3 Structure GUI
Last Release on Sep 18, 2024
Decypher
Last Release on Nov 7, 2023
MDK IO Data Entity
Last Release on Mar 6, 2024
Metingear Action
Last Release on Mar 6, 2024
MDK Tool Homology
Last Release on Mar 6, 2024
This module deals with bioinformatics web services that could be used to process Biojava objects in a useful manner.
Last Release on Sep 18, 2024
Biojava3 Phylo
Last Release on Sep 18, 2024
Toolkit to analyze genomic variation data, built on the GATK with Clojure
Last Release on Nov 7, 2014