Compile Dependencies (0)
| Category/License | Group / Artifact | Version | Updates |
|---|
Provided Dependencies (4)
| Category/License | Group / Artifact | Version | Updates | |
|---|---|---|---|---|
GPL
| net.sourceforge.ondex.core » base | 5.2 | 7.0.1 | |
GPL
| net.sourceforge.ondex.core » tools | 5.2 | 7.0.1 | |
GPL
| net.sourceforge.ondex.core » workflow-component-descriptor | 5.2 | 7.0.1 | |
GPL
| net.sourceforge.ondex.core » workflow-api | 5.2 | 7.0.1 |
Test Dependencies (1)
| Category/License | Group / Artifact | Version | Updates | |
|---|---|---|---|---|
GPL
| net.sourceforge.ondex » datadir | 5.2 | 7.0.1 |
Managed Dependencies (81)
| Category/License | Group / Artifact | Version | Updates | |
|---|---|---|---|---|
Logging
EPL 2.0 +1
| ch.qos.logback
»
logback-classic1 vulnerability Implementation of the SLF4J API for Logback, a reliable, generic, fast and flexible logging framework. | 1.2.3 | 1.5.32 | |
JSON Lib
Apache 2.0
| com.fasterxml.jackson.core
»
jackson-core1 vulnerability Core Jackson processing abstractions (aka Streaming API), implementation for JSON | 2.14.1 | 3.1.3 | |
JSON Lib
Apache 2.0
| com.fasterxml.jackson.core
»
jackson-databind General data-binding functionality for Jackson: works on core streaming API | 2.14.1 | 3.1.3 | |
YAML
Apache 2.0
| com.fasterxml.jackson.dataformat
»
jackson-dataformat-yaml Support for reading and writing YAML-encoded data via Jackson abstractions. | 2.14.1 | 3.1.3 | |
Core Utils
Apache 2.0
| com.google.guava
»
guava2 vulnerabilities Guava is a suite of core and expanded libraries that include | 30.1.1-jre | 33.6.0-jre | |
JSON Lib
Apache 2.0
| com.googlecode.json-simple
»
json-simple A simple Java toolkit for JSON | 1.1.1 | ✔ | |
RDF
Apache 2.0
| com.hp.hpl.jena » jena | 2.5.7 | 6.1.0 | |
JSON Lib
Apache 2.0
| com.jayway.jsonpath
»
json-path1 vulnerability A library to query and verify JSON | 2.7.0 | 3.0.0 | |
Apache 2.0
| com.machinezoo.noexception
»
noexception Functional programming for exception handlers. | 1.3.2 | 1.9.1 | |
Apache 2.0
| com.machinezoo.noexception
»
noexception Functional programming for exception handlers. | 1.9.0 | 1.9.1 | |
CSV
Apache 2.0
| com.opencsv
»
opencsv A simple library for reading and writing CSV in Java | 5.1 | 5.12.0 | |
Apache 2.0
| com.sleepycat
»
je Berkley Database Java Edition - build and runtime support. | 4.0.92 | 18.3.12 | |
XML Processing
EDL 1.0
| com.sun.xml.bind
»
jaxb-impl Old JAXB Runtime module. Contains sources required for runtime processing. | 4.0.0 | 4.0.8 | |
XML Processing
BSD 3-clause
| com.thoughtworks.xstream
»
xstream1 vulnerability XStream is a simple and fast library to serialize objects to XML and back again with a low memory footprint. | 1.4.20 | 1.4.21 | |
Reflection
Apache 2.0
| commons-beanutils
»
commons-beanutils1 vulnerability Apache Commons BeanUtils provides an easy-to-use but flexible wrapper around reflection and introspection. | 1.9.4 | 1.11.0 | |
CLI Parser
Apache 2.0
| commons-cli
»
commons-cli Apache Commons CLI provides a simple API for presenting, processing, and validating a Command Line Interface. | 1.4 | 1.11.0 | |
I/O
Apache 2.0
| commons-io
»
commons-io1 vulnerability The Apache Commons IO library contains utility classes, stream implementations, file filters, | 2.8.0 | 2.22.0 | |
| info.marcobrandizi
»
rdfutils-core The core of Jena-Utils, from which implementations that are specific of RDF frameworks depend | 4.1 | 5.0.1 | ||
| info.marcobrandizi
»
rdfutils-jena The Jena-specific implementation of Jena Utils | 4.1 | 5.0.1 | ||
CLI Parser
Apache 2.0
| info.picocli
»
picocli Java command line parser with both an annotations API and a programmatic API. Usage help with ANSI styles and colors. ... | 4.6.2 | 4.7.7 | |
XML Processing
EDL 1.0
| jakarta.xml.bind
»
jakarta.xml.bind-api Jakarta XML Binding (JAXB) API that allows Java developers to map Java classes to XML representations and perform ... | 4.0.0 | 4.0.5 | |
Annotation Lib
EPL 2.0 +1
| javax.annotation
»
javax.annotation-api Jakarta Annotations API | 1.3.2 | 3.0.0 | |
Annotation Lib
CDDL +1
| javax.annotation
»
jsr250-api Common Annotations for the JavaTM Platform API | 1.0 | 1.3.2 | |
Testing
EPL 2.0
| junit
»
junit JUnit Jupiter is the API for writing tests using JUnit 5. | 4.13.2 | 6.0.3 | |
Logging
Apache 2.0
| log4j
»
log4j6 vulnerabilities Implementation for Apache Log4J, a highly configurable logging tool that focuses on performance and low garbage ... | 1.2.17 | 2.26.0 | |
Collections
Apache 2.0
| net.sourceforge.collections » collections-generic1 vulnerability | 4.01 | ✔ | |
Excel Lib
LGPL
| net.sourceforge.jexcelapi
»
jxl JExcelApi is a java library which provides the ability to read, write, and modify Microsoft Excel spreadsheets. | 2.6.10 | 2.6.12 | |
Collections
Apache 2.0
| org.apache.commons
»
commons-collections4 The Apache Commons Collections package contains types that extend and augment the Java Collections Framework. | 4.1 | 4.5.0 | |
Core Utils
Apache 2.0
| org.apache.commons
»
commons-lang31 vulnerability Apache Commons Lang, a package of Java utility classes for the classes that are in java.lang's hierarchy, or are ... | 3.5 | 3.20.0 | |
Math Lib
Apache 2.0
| org.apache.commons
»
commons-math3 Alternate implementations of JDK's "Math" functions. | 3.6.1 | 4.0-beta1 | |
Core Utils
Apache 2.0
| org.apache.commons
»
commons-lang31 vulnerability Apache Commons Lang, a package of Java utility classes for the classes that are in java.lang's hierarchy, or are ... | 3.12.0 | 3.20.0 | |
Apache 2.0
| org.apache.cxf
»
cxf-wstx-msv-validation Apache CXF Woodstox/MSV Schema Validation | 2.2 | 2.7.18 | |
Apache 2.0
| org.apache.jena
»
apache-jena-libs A POM artifact that references all the standard Jena Libraries with a single dependency. | 4.7.0 | 6.1.0 | |
Apache 2.0
| org.apache.jena
»
jena-osgi Embedding the main Jena modules (iri/core/arq/tdb) in a single OSGi bundle. | 4.7.0 | 4.1.0 | |
Logging
Apache 2.0
| org.apache.logging.log4j
»
log4j-api API for Apache Log4J, a highly configurable logging tool that focuses on performance and low garbage generation. It has ... | 2.18.0 | 2.26.0 | |
Logging
Apache 2.0
| org.apache.logging.log4j
»
log4j-core3 vulnerabilities Implementation for Apache Log4J, a highly configurable logging tool that focuses on performance and low garbage ... | 2.18.0 | 2.26.0 | |
Apache 2.0
| org.apache.logging.log4j
»
log4j-layout-template-json1 vulnerability JSON Template Layout is a customizable, efficient, and garbage-free JSON generating Apache Log4j layout. | 2.18.0 | 2.26.0 | |
Logging Bridge
Apache 2.0
| org.apache.logging.log4j
»
log4j-1.2-api1 vulnerability The Apache Log4j 1.x Compatibility API | 2.18.0 | 2.26.0 | |
Logging Bridge
Apache 2.0
| org.apache.logging.log4j
»
log4j-jcl The Apache Log4j Commons Logging Adapter | 2.18.0 | 2.26.0 | |
Logging Bridge
Apache 2.0
| org.apache.logging.log4j
»
log4j-flume-ng The Apache Log4j Flume Appender | 2.18.0 | 2.23.1 | |
Apache 2.0
| org.apache.logging.log4j
»
log4j-taglib The Apache Log4j Tag Library for Web Applications | 2.18.0 | 2.26.0 | |
Apache 2.0
| org.apache.logging.log4j
»
log4j-jmx-gui Swing GUI to remotely edit Log4j configurations. This includes a JConsole plugin and a StatusLogger monitor. | 2.18.0 | 2.22.0 | |
Logging Bridge
Apache 2.0
| org.apache.logging.log4j
»
log4j-slf4j-impl The Apache Log4j SLF4J 2.0 API binding to Log4j 2 Core | 2.18.0 | 2.26.0 | |
Logging Bridge
Apache 2.0
| org.apache.logging.log4j
»
log4j-slf4j18-impl The Apache Log4j SLF4J 1.8 API binding to Log4j 2 Core | 2.18.0 | ✔ | |
Logging Bridge
Apache 2.0
| org.apache.logging.log4j
»
log4j-to-slf4j The Apache Log4j binding between Log4j 2 API and SLF4J. | 2.18.0 | 2.26.0 | |
Apache 2.0
| org.apache.logging.log4j
»
log4j-appserver Provide Log4j as the logging implementation for application servers | 2.18.0 | 2.26.0 | |
Logging
Apache 2.0
| org.apache.logging.log4j
»
log4j-web The Apache Log4j support for web servlet containers | 2.18.0 | 2.26.0 | |
Apache 2.0
| org.apache.logging.log4j
»
log4j-couchdb CouchDB appender for Log4j. | 2.18.0 | 2.26.0 | |
Apache 2.0
| org.apache.logging.log4j
»
log4j-mongodb4 MongoDB appender for Log4j using the MongoDB 4 driver API. | 2.18.0 | 2.26.0 | |
Apache 2.0
| org.apache.logging.log4j
»
log4j-mongodb3 MongoDB appender for Log4j using the MongoDB 3 driver API. | 2.18.0 | 2.23.1 | |
Apache 2.0
| org.apache.logging.log4j
»
log4j-cassandra Cassandra appender for Log4j. | 2.18.0 | 2.26.0 | |
Apache 2.0
| org.apache.logging.log4j
»
log4j-jpa Apache Log4j Java Persistence API Appender. | 2.18.0 | 2.26.0 | |
Apache 2.0
| org.apache.logging.log4j
»
log4j-iostreams The Apache Log4j streams to log event converters | 2.18.0 | 2.26.0 | |
Logging Bridge
Apache 2.0
| org.apache.logging.log4j
»
log4j-jul A `java.util.logging` Handler that forwards events to the Log4j API. | 2.18.0 | 2.26.0 | |
Apache 2.0
| org.apache.logging.log4j
»
log4j-jpl The Apache Log4j implementation of java.lang.System.LoggerFinder | 2.18.0 | 2.26.0 | |
Apache 2.0
| org.apache.logging.log4j
»
log4j-liquibase The Apache Log4j Liquibase binding to Log4j 2 Core | 2.18.0 | 2.19.0 | |
Apache 2.0
| org.apache.logging.log4j
»
log4j-docker Apache Log4j Docker Support | 2.18.0 | 2.26.0 | |
Apache 2.0
| org.apache.logging.log4j
»
log4j-kubernetes Apache Log4j Kubernetes Support | 2.18.0 | 2.23.1 | |
Apache 2.0
| org.apache.logging.log4j
»
log4j-spring-boot Apache Log4j Spring Boot Support | 2.18.0 | 2.26.0 | |
Apache 2.0
| org.apache.logging.log4j
»
log4j-spring-cloud-config-client Apache Log4j Spring Cloud Config Client Support | 2.18.0 | 2.26.0 | |
Full-Text Indexing
Apache 2.0
| org.apache.lucene
»
lucene-core Apache Lucene (module: core) | 6.6.0 | 10.4.0 | |
Apache 2.0
| org.apache.lucene
»
lucene-queryparser Apache Lucene (module: queryparser) | 6.6.0 | 10.4.0 | |
Apache 2.0
| org.apache.lucene
»
lucene-analyzers-common Apache Lucene (module: common) | 6.6.0 | 10.4.0 | |
XML Processing
Apache 2.0
| org.codehaus.woodstox
»
woodstox-core-lgpl Woodstox is a high-performance XML processor that implements Stax (JSR-173), | 4.0.11 | 7.1.1 | |
BSD 2-clause
| org.codehaus.woodstox
»
stax2-api Stax2 API is an extension to basic Stax 1.0 API that adds significant new functionality, such as full-featured ... | 4.2 | 4.3.0 | |
JSON Lib
Public
| org.json
»
json2 vulnerabilities JSON is a light-weight, language independent, data interchange format. | 20220320 | 20251224 | |
HTML Parser
MIT
| org.jsoup
»
jsoup jsoup is a Java library that simplifies working with real-world HTML and XML. It offers an easy-to-use API for URL ... | 1.15.3 | 1.22.2 | |
Apache 2.0
| org.neo4j.driver
»
neo4j-java-driver Access to the Neo4j graph database through Java | 4.4.2 | 6.1.0 | |
Logging Bridge
MIT
| org.slf4j
»
slf4j-log4j12 SLF4J Reload4j Provider | 1.7.36 | 2.0.18 | |
Logging Bridge
Apache 2.0
| org.slf4j
»
log4j-over-slf4j Log4j implemented over SLF4J | 1.7.36 | 2.0.18 | |
Logging Bridge
Apache 2.0
| org.slf4j
»
jcl-over-slf4j Jakarta/Apache commons logging 1.2 implemented over SLF4J | 1.7.36 | 2.0.18 | |
Core Utils
Apache 2.0
| org.springframework
»
spring-core1 vulnerability Basic building block for Spring that in conjunction with Spring Beans provides dependency injection and IoC features. | 5.3.25 | 7.0.7 | |
Dep Injection
Apache 2.0
| org.springframework
»
spring-context2 vulnerabilities Spring Context provides access to configured objects like a registry (a context). It inherits its features from Spring ... | 5.3.25 | 7.0.7 | |
Dep Injection
Apache 2.0
| org.springframework
»
spring-beans Spring Beans provides the configuration framework and basic functionality to instantiate, configure, and assemble java ... | 5.3.25 | 7.0.7 | |
Web Framework
Apache 2.0
| org.springframework
»
spring-web6 vulnerabilities Spring Web provides integration features such as multipart file upload functionality and the initialization of the IoC ... | 5.3.25 | 7.0.7 | |
Web Framework
Apache 2.0
| org.springframework
»
spring-webmvc9 vulnerabilities Spring webmvc contains Spring's model-view-controller (MVC) and REST Web Services implementation for web applications. ... | 5.3.25 | 7.0.7 | |
| uk.ac.ebi » jutils | 11.0.1 | |||
| uk.ac.rothamsted.kg » rdf2neo | 4.0 | 5.1 | ||
| uk.ac.rothamsted.kg » rdf2neo-cli | 4.0 | 5.1 | ||
| uk.ac.rothamsted.kg » neo4j-utils | 4.0 | |||
XML Processing
Apache 2.0
| xerces
»
xercesImpl Xerces2 provides high performance, fully compliant XML parsers in the Apache Xerces family. This new version of Xerces ... | 2.12.2 | ✔ |
