A set of command line tools (in Java) for manipulating high-throughput sequencing (HTS) data and formats such as SAM/BAM/CRAM and VCF.

Latest Versions

186 versions โ†’
VersionVulnerabilitiesUsagesDate
3.4.x
3.4.0
1
Apr 13, 2025
3.3.x
3.3.0
1
Oct 09, 2024
3.2.x
3.2.0
1
Jun 27, 2024
3.1.x
3.1.1
1
Nov 15, 2023
3.1.0
0
Jul 28, 2023
3.0.x
3.0.0
1
Feb 22, 2023
2.27.x
2.27.5
4
Oct 06, 2022
2.27.4
0
Jun 29, 2022
2.27.3
0
Jun 09, 2022
2.26.x
2.26.11
1
Feb 24, 2022
2.26.10
2
Jan 03, 2022
2.26.9
0
Dec 21, 2021
2.25.x
2.25.7
2
Jul 21, 2021
2.25.6
0
Jun 14, 2021
2.25.5
2
May 18, 2021
2.24.x
2.24.2
0
Feb 03, 2021
2.24.1
0
Jan 21, 2021
2.24.0
2
Jan 04, 2021
2.23.x
2.23.9
0
Dec 08, 2020
2.23.8
2
Oct 14, 2020
2.23.7
2
Oct 13, 2020
186 versions โ†’